ChEMBL-MCP-Server vs everything

Side-by-side comparison to help you pick between these two MCP servers.

	ChEMBL-MCP-Server by Augmented-Nature	everything by modelcontextprotocol
Stars	★ 83	★ 85,748
30d uses	—	—
Score	48	77
Official	—	✓
Categories	DatabaseAI / LLM ToolsDeveloper Tools	Developer ToolsAI / LLM ToolsOther
Language	JavaScript	TypeScript
Last commit	5 mo ago	this month

ChEMBL-MCP-Server · Summary

A comprehensive MCP server providing 22 specialized tools for ChEMBL chemical database access in drug discovery research.

everything · Summary

Official MCP test server exercising all protocol features for client builders.

ChEMBL-MCP-Server · Use cases

Drug discovery researchers querying bioactivity data for specific targets
Chemists searching for compounds with specific structural properties
AI systems performing integrated analysis of chemical data through MCP

everything · Use cases

Testing MCP client implementations against all protocol features
Learning MCP protocol capabilities through a reference server
Validating client compatibility with different transport methods

ChEMBL-MCP-Server · Install

Installation

Prerequisites

Node.js (v16 or higher)
npm or yarn

Setup

Clone the repository:

git clone <repository-url>
cd chembl-server

Install dependencies:

npm install

Build the project:

npm run build

Adding to Claude Desktop

Add the server to your Claude Desktop MCP configuration:

{
  "mcpServers": {
    "chembl": {
      "command": "node",
      "args": ["/path/to/chembl-server/build/index.js"],
      "env": {}
    }
  }
}

everything · Install

NPX (recommended)

{
  "mcpServers": {
    "everything": {
      "command": "npx",
      "args": ["-y", "@modelcontextprotocol/server-everything"]
    }
  }
}

On Windows, use cmd /c:

{
  "mcpServers": {
    "everything": {
      "command": "cmd",
      "args": ["/c", "npx", "-y", "@modelcontextprotocol/server-everything"]
    }
  }
}

Docker

{
  "mcpServers": {
    "everything": {
      "command": "docker",
      "args": ["run", "-i", "--rm", "mcp/everything"]
    }
  }
}

Global install

npm install -g @modelcontextprotocol/server-everything@latest
npx @modelcontextprotocol/server-everything

Comparison generated from public README + GitHub signals. Last updated automatically.